GBIF
Metadata last updated on 21.11.2024 12:09
Resources
- A global database for the distributions of crop wild relatives
<p>This dataset originally held 5 647 442 total records, where 34% of the records corresponded to germplasm accessions and 66% to herbarium samples. A total of 3 231 286 records had cross-checked coordinates (see Figure 2)... - Amplicon sequencing of Tara Oceans DNA samples corresponding to size fractions for protists.
Analysis of 18S DNA in Tara Oceans Protists size fractions through amplicon sequencing: Seawater was filtered from different depths to retain small and large cell sizes. The DNA was extracted and amplified by PCR. - Bacterial diversity in the South Adriatic Sea during winter of 2016
Bacteria represent the most important microorganisms in the world oceans comprising up to 75% of the total biomass at surface and playing fundamental processes for biogeochemistry. Along the water column, they are useful markers of the trophic state of water masses, therefore representing useful ecological indicators in the surveyed areas... - Biodiversitätsdatenbank Salzburg
The Haus der Natur maintains a biodiversity database documenting the animal and plant species of Salzburg and adjacent areas (mainly). The database is growing continuousely and includes detailed information about the distribution of many groups of animals, fungi and plants. Special attention is given to the endangered species, threatened habitats, and protected areas of Salzburg... - BirdMap Data - GPS tracking of Storks, Cranes and birds of prey, breeding in Northern and Eastern Europe
NGO Kotkaklubi (Eagle Club) and 5D Vision Ltd have developed an online portal birdmap.5dvision.ee, to visualize GPS data of migratory birds. Current dataset serves as a copy of source data for this visualization. The portal operates since 2006. Birds of 12 different species have been monitored, total number of individuals has been more than 160... - EURISCO, The European Genetic Resources Search Catalogue
The EURISCO web catalogue automatically receives data from the National Inventories (NI). It effectively provides access to all ex situ PGR information in Europe and thus facilitates locating and accessing PGR. - Freshwater fishes of the Western Balkans
<p>Database of the widely distributed data for freshwater fish occurrences of the countries of the Western Balkans (Slovenia, Croatia, Bosnia & Herzegovina, Montenegro, Macedonia). These data are actually hidden in databases of national fisheries institutes, databases of regional fish collections and as well in grey literature (about 700 references)... - Global soil organisms
Global distribution of soil organisms. Data deposited in this project represent unique (non-clustered) sequences. These sequences are members of the curated OTU list (tag-jump filtered and chimera-free, clustered at 98% similarity threshold) from the GSMc dataset (Tedersoo et al., Fungal Diversity, 2021, https://doi.org/10.1007/s13225-021-00493-7)... - Historical landings from the Rijeka (Croatia) fish market between 1914 and 1932
<p>Historical landings from the Rijeka (currently Croatia) fish market for the period 1914-1932 were digitised from D’Ancona (1926). At the time, the Rijeka fish market was one of the most important in the area together with Trieste (currently Italy) and Venice (Italy). These fish markets collected almost all fish caught in the Northern Adriatic Sea at time.</p> - INSDC Host Organism Sequences
<p>This dataset contains INSDC sequences associated with host organisms. The dataset is prepared periodically using the public ENA API (https://www.ebi.ac.uk/ena/portal/api/) using the methods described below.</p><p>EMBL-EBI also publishes other records in separate datasets (https://www.gbif.org/publisher/ada9d123-ddb4-467d-8891-806ea8d94230)... - International Barcode of Life project (iBOL)
<p>Established in 2008, the International Barcode of Life Consortium (iBOL, http://www.ibol.org/) is a research alliance of nations with the desire to transform biodiversity science by building the DNA barcode reference libraries, the sequencing facilities, the informatics platforms, the analytical protocols, and the international collaboration required to inventory and assess biodiversity.</p> - MIZ PAS Zoological Collections
The Museum and Institute of Zoology of the Polish Academy of Sciences (MIZ PAS) hosts the largest zoological collection in Poland. The institution provides access to over 7,000,000 specimens, including 50,000 types, that have been collected since the 19th century in ecosystems around the World (e.g., Brazil, Ecuador, Egypt, Poland, Peru, Siberia, Korea, Vietnam)... - Marine sponges and seawater Targeted Locus (Loci)
Assessment of microbial diversity of marine sponges and seawater - Meise Botanic Garden Herbarium (BR)
<p>Meise Botanic Garden (MeiseBG) has a history that goes back to 1796. Today, it is an internationally recognized botanic garden in a park of 92 hectares, and a centre of excellence for plant biodiversity research... - Metagenomic approach for studying picoeukaryotes in a extreme oligotrophic marginal sea (South Adriatic Sea) during winter mixed conditions
This study investigates this smallest plankton fraction (cells ≤ 3µm) in both prokaryotic and eukaryotic perspective considering changes of the community in the photic zone from coastal to open sea during mixed winter conditions... - NMNH Extant Specimen Records (USNM, US)
<p>Public records of accessioned specimens and observations curated by the National Museum of Natural History, Smithsonian Institution. These data are from the Departments of Botany, Entomology, Invertebrate Zoology and Vertebrate Zoology (Amphibians & Reptiles, Birds, Fishes, and Mammals) and include more than 270,000 primary type specimen records.</p> - Natural History Collections of the Faculty of Biology AMU
- Natural History Museum (London) Collection Specimens
<p>Natural History Museum (London) Collection Specimens</p> - Natural History Museum Rotterdam - Specimens
<p>Specimen database of the Natural History Museum Rotterdam. The total collection is estimated to hold 420.000 specimens, of which over 85% are digitized at the specimen level and contained in this dataset. Arthropods (56%; mostly European) and molluscs (30%; worldwide recent specimens, fossil specimens from North-West Europe) make up the bulk of the collection... - Natural History Museum, Vienna - Herbarium W
<p>n/a</p> - Naturalis Biodiversity Center (NL) - Botany
<p>This database contains specimen records from the former herbarium of the Leiden University within the botanical collection of the Naturalis Biodiversity Center (Leiden, Netherlands). The Department of Botany houses the National Herbarium of the Netherlands (NHN) which consists of herbarium collections of the universities of Leiden, Wageningen and Utrecht... - Naturalis Biodiversity Center (NL) - Mollusca
<p>Database contains specimen records from the Mollusca collection of the Naturalis Biodiversity Center (Leiden, Netherlands). The zoological specimens come from the National Museum of Natural History (RMNH; Rijksmuseum voor Natuurlijke Historie), later National Museum of Natural History, Naturalis in Leiden and the Zoological Museum Amsterdam (ZMA) and new acquisitions... - Pl@ntNet observations
<p>Pl@ntNet is a participatory botanical observation platform allowing to identify plants from photos (using deep learning) and to share the observations with the community. The platform has three main front-ends: Pl@ntNet androïd (http://bit.ly/1K4D1eU), Pl@ntNet iOS (http://apple.co/2cMtWgu) and Pl@ntNet web (https://identify.plantnet.org/)... - Records of saproxylic beetles collected through citizen science campaign - Jeste li ih vidjeli?
The dataset represent records of saproxylic beetles collected through citizen science campaign "Jeste li ih vidjeli?" ("Did you see them?"), organized by the Institute for Environment and Nature, Croatia. This campaign is ongoing since 2015. The saproxylic beetle records are reported by public through specific on-line form or by email... - Relative abundance of potentially pathogenic bacteria in treated wastewater and coastal water, Adriatic Sea time-series 2019-2020
The dataset reports the relative abundance of potentially pathogenic bacteria in treated wastewater and coastal water samples collected in the proximity of discharge points at sea. The data derive from Next Generation Sequencing of amplicons of the V4-V5 region of 16S rRNA gene... - Royal Botanic Gardens, Kew - Herbarium Specimens
<p>The Herbarium at the Royal Botanic Gardens Kew houses approximately seven million plant specimens, collected from all around the world. Specimens are either pressed and dried or preserved in spirit... - Steiermärkisches Landesmuseum Joanneum - Herbarium GJO
<p>n/a</p> - Trawl survey data from the Jabuka Pit area (central-eastern Adriatic Sea, Mediterranean) collected between 1956 and 1971
<p>Between October 1956 and January 1971, the Institute of Oceanography and Fisheries (IOF, Croatia) performed a series of trawl-surveys in the Croatian coastal waters between Split and Šibenik (central-eastern Adriatic, Mediterranean) in the area of the Jabuka Pit with two motorboats, “Bios” (300 HP; LOA = 26 m) and “Predvodnik” (200 HP; LOA = 19 m).</p> - Trawl-survey data from the “expedition Hvar” in the Adriatic Sea (Mediterranean) collected in 1948-1949
<p>The “expedition HVAR” (1948-1949), organised by the Institute of Oceanography and Fisheries of Split (IOF, Croatia), was the first large-scale fishery-independent trawl-survey ever performed in the Adriatic Sea... - Trawl-survey data in the central-eastern Adriatic Sea (Mediterranean) collected in 1957 and 1958
<p>Between June 5th 1957 and July 4th 1958 a series of trawl-surveys were organised by the Institute of Oceanography and Fisheries (IOF, Croatia) in the Croatian channels around the Hvar Island (central-eastern Adriatic).</p> - University of Graz, Institute of Plant Sciences - Herbarium GZU
<p>n/a</p> - University of Vienna, Institute for Botany - Herbarium WU
<p>The Herbarium of the University of Vienna (Index Herbariorum Acronym WU) represents one of the largest collections of its kind being purely university bound and holds about 1.5 million objects. After the botanical collections of the Austrian empire in Vienna were transferred to the Natural History Museum of Vienna a university herbarium was initiated de novo by Prof. A... - World distribution of the aquatic Oligochaeta
This is a database of published findings of aquatic Oligochaeta (Annelida, Clitellata) species, including the literature sources and distribution maps. Data on the Aphanoneura (Annelida, Polychaeta) and Branchiobdellida (Annelida, Clitellata) are included as well, since these worms have often been listed as oligochaetes. The database is still in progress... - World flea collection of Slovenian Museum of Natural History (excluding Slovenia)
Central Slovenian Scientific Collection of Siphonaptera includes 8,497 microscopic slides and some material preserved in ethanol. From 1950 until the present it is curated by Savo Brelih, recently with help of dr. Tomi Trilar. Collection is one of the largest from the Balkan Peninsula and representative for the overview of the flea (Siphonaptera) fauna of this area... - ZOBODAT (Zoological Botanical Database)
<p>ZOBODAT (Zooligical-Botanical Database, formerly ZOODAT) is a digital, biogeographical database including analysis, documentation and communication facilities. Founded in 1972 by Univ.-Prof. Dr. Ernst Rudolf Reichl</p><p>ZOBODAT is available online at:</p><p>www.zobodat.at</p>
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